Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.62□□□□□ -0.39
CiitaP79621 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Gm12247-201ENSMUST00000117585 670 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Gm15615-201ENSMUST00000118876 198 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.62□□□□□ -0.39
CiitaP79621 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Gm6485-201ENSMUST00000160676 439 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CiitaP79621 Gm8365-201ENSMUST00000197334 648 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Gm44545-201ENSMUST00000208262 746 ntBASIC12.62□□□□□ -0.39
CiitaP79621 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.62□□□□□ -0.39
CiitaP79621 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.62□□□□□ -0.39
CiitaP79621 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.62□□□□□ -0.39
CiitaP79621 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.62□□□□□ -0.39
CiitaP79621 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CiitaP79621 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CiitaP79621 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.62□□□□□ -0.39
CiitaP79621 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.62□□□□□ -0.39
CiitaP79621 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.62□□□□□ -0.39
CiitaP79621 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CiitaP79621 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.62□□□□□ -0.39
CiitaP79621 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CiitaP79621 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CiitaP79621 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.61□□□□□ -0.39
CiitaP79621 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CiitaP79621 Gm4294-201ENSMUST00000105169 614 ntBASIC12.61□□□□□ -0.39
CiitaP79621 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CiitaP79621 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.61□□□□□ -0.39
CiitaP79621 Gm13888-201ENSMUST00000119148 422 ntBASIC12.61□□□□□ -0.39
CiitaP79621 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.61□□□□□ -0.39
CiitaP79621 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.61□□□□□ -0.39
CiitaP79621 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CiitaP79621 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.61□□□□□ -0.39
CiitaP79621 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.61□□□□□ -0.39
CiitaP79621 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CiitaP79621 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CiitaP79621 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CiitaP79621 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CiitaP79621 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.6□□□□□ -0.39
CiitaP79621 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.6□□□□□ -0.39
CiitaP79621 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CiitaP79621 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CiitaP79621 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.6□□□□□ -0.39
CiitaP79621 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms