Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Stra8P70278 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Stra8P70278 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Stra8P70278 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC16.07■□□□□ 0.16
Stra8P70278 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC16.07■□□□□ 0.16
Stra8P70278 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Stra8P70278 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Stra8P70278 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.07■□□□□ 0.16
Stra8P70278 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Gm36940-201ENSMUST00000194281 2036 ntBASIC16.07■□□□□ 0.16
Stra8P70278 Gm44755-201ENSMUST00000207830 2102 ntBASIC16.07■□□□□ 0.16
Stra8P70278 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Stra8P70278 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Stra8P70278 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Stra8P70278 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC16.07■□□□□ 0.16
Stra8P70278 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Stra8P70278 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC16.06■□□□□ 0.16
Stra8P70278 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Stra8P70278 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Stra8P70278 Gm22323-201ENSMUST00000103832 109 ntBASIC16.06■□□□□ 0.16
Stra8P70278 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Stra8P70278 Gm14109-201ENSMUST00000118814 309 ntBASIC16.06■□□□□ 0.16
Stra8P70278 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Stra8P70278 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.06■□□□□ 0.16
Stra8P70278 Gm37259-201ENSMUST00000193903 849 ntBASIC16.06■□□□□ 0.16
Stra8P70278 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.06■□□□□ 0.16
Stra8P70278 Gzmn-202ENSMUST00000225535 989 ntBASIC16.06■□□□□ 0.16
Stra8P70278 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.06■□□□□ 0.16
Stra8P70278 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.06■□□□□ 0.16
Stra8P70278 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Stra8P70278 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.05■□□□□ 0.16
Stra8P70278 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Stra8P70278 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Gm45053-201ENSMUST00000206112 2499 ntBASIC16.05■□□□□ 0.16
Stra8P70278 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.05■□□□□ 0.16
Stra8P70278 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.05■□□□□ 0.16
Stra8P70278 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Gm5070-201ENSMUST00000177599 862 ntBASIC16.05■□□□□ 0.16
Stra8P70278 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.05■□□□□ 0.16
Stra8P70278 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.05■□□□□ 0.16
Stra8P70278 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Gm6082-201ENSMUST00000215204 454 ntBASIC16.05■□□□□ 0.16
Stra8P70278 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.05■□□□□ 0.16
Stra8P70278 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Stra8P70278 Gm43931-201ENSMUST00000204817 2870 ntBASIC16.05■□□□□ 0.16
Stra8P70278 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Stra8P70278 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Stra8P70278 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Stra8P70278 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms