Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.92□□□□□ -0.66
Six5P70178 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.92□□□□□ -0.66
Six5P70178 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.92□□□□□ -0.66
Six5P70178 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.92□□□□□ -0.66
Six5P70178 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Six5P70178 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.91□□□□□ -0.66
Six5P70178 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Six5P70178 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Six5P70178 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Gm13035-201ENSMUST00000117496 342 ntBASIC10.91□□□□□ -0.66
Six5P70178 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.91□□□□□ -0.66
Six5P70178 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Six5P70178 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.91□□□□□ -0.66
Six5P70178 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.91□□□□□ -0.66
Six5P70178 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.91□□□□□ -0.66
Six5P70178 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Six5P70178 Gm28450-201ENSMUST00000187349 638 ntBASIC10.91□□□□□ -0.66
Six5P70178 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.91□□□□□ -0.66
Six5P70178 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.91□□□□□ -0.66
Six5P70178 Gm45575-201ENSMUST00000210283 548 ntBASIC10.91□□□□□ -0.66
Six5P70178 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.91□□□□□ -0.66
Six5P70178 Gm5363-201ENSMUST00000211927 938 ntBASIC10.91□□□□□ -0.66
Six5P70178 Gm6867-201ENSMUST00000219165 425 ntBASIC10.91□□□□□ -0.66
Six5P70178 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.91□□□□□ -0.66
Six5P70178 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.91□□□□□ -0.66
Six5P70178 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Six5P70178 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.91□□□□□ -0.66
Six5P70178 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Six5P70178 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.91□□□□□ -0.66
Six5P70178 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.9□□□□□ -0.66
Six5P70178 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Six5P70178 Gm15515-201ENSMUST00000117827 822 ntBASIC10.9□□□□□ -0.66
Six5P70178 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.9□□□□□ -0.66
Six5P70178 Gm11450-201ENSMUST00000121144 333 ntBASIC10.9□□□□□ -0.66
Six5P70178 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Six5P70178 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Six5P70178 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Six5P70178 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms