Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.86□□□□□ -0.35
Hmgb1P63158 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmgb1P63158 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Hmgb1P63158 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm24255-201ENSMUST00000104481 128 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm14381-201ENSMUST00000122105 414 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm8343-201ENSMUST00000182705 994 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Mir8109-201ENSMUST00000184375 117 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hmgb1P63158 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm6450-201ENSMUST00000200896 574 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.85□□□□□ -0.35
Hmgb1P63158 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hmgb1P63158 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Hmgb1P63158 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.85□□□□□ -0.35
Hmgb1P63158 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 AA914427-201ENSMUST00000193194 1166 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 Gm38341-201ENSMUST00000195357 515 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 Gm38317-201ENSMUST00000195564 343 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Gm4157-201ENSMUST00000211647 679 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hmgb1P63158 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Hmgb1P63158 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.84□□□□□ -0.35
Hmgb1P63158 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmgb1P63158 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hmgb1P63158 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms