Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.93□□□□□ -0.5
Ybx1P62960 Gm18561-201ENSMUST00000206027 804 ntBASIC11.93□□□□□ -0.5
Ybx1P62960 Gm17825-201ENSMUST00000206836 794 ntBASIC11.93□□□□□ -0.5
Ybx1P62960 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.93□□□□□ -0.5
Ybx1P62960 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ybx1P62960 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ybx1P62960 Mir483-201ENSMUST00000093631 73 ntBASIC11.93□□□□□ -0.5
Ybx1P62960 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Ybx1P62960 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.93□□□□□ -0.5
Ybx1P62960 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.93□□□□□ -0.5
Ybx1P62960 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ybx1P62960 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.93□□□□□ -0.5
Ybx1P62960 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Ybx1P62960 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ybx1P62960 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ybx1P62960 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Ybx1P62960 Gm13117-201ENSMUST00000120894 691 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.92□□□□□ -0.5
Ybx1P62960 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ybx1P62960 Gm5298-201ENSMUST00000201122 892 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.92□□□□□ -0.5
Ybx1P62960 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ybx1P62960 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ybx1P62960 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.92□□□□□ -0.5
Ybx1P62960 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ybx1P62960 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.92□□□□□ -0.5
Ybx1P62960 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ybx1P62960 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ybx1P62960 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 Gm11980-201ENSMUST00000121445 986 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.91□□□□□ -0.5
Ybx1P62960 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ybx1P62960 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 Gm26134-201ENSMUST00000178484 110 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 Mir8093-201ENSMUST00000185043 137 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.91□□□□□ -0.5
Ybx1P62960 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ybx1P62960 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.91□□□□□ -0.5
Ybx1P62960 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms