Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm14832-201ENSMUST00000121289 322 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm15276-201ENSMUST00000145953 498 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.29□□□□□ -0.76
Sec61a1P61620 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm29199-201ENSMUST00000187766 775 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm10076-201ENSMUST00000073238 384 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.29□□□□□ -0.76
Sec61a1P61620 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sec61a1P61620 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sec61a1P61620 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sec61a1P61620 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm12314-201ENSMUST00000118104 538 ntBASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm8885-201ENSMUST00000189382 598 ntBASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.28□□□□□ -0.76
Sec61a1P61620 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.28□□□□□ -0.76
Sec61a1P61620 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.28□□□□□ -0.76
Sec61a1P61620 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.28□□□□□ -0.76
Sec61a1P61620 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sec61a1P61620 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sec61a1P61620 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.27□□□□□ -0.76
Sec61a1P61620 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Sec61a1P61620 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.27□□□□□ -0.76
Sec61a1P61620 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.27□□□□□ -0.76
Sec61a1P61620 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.27□□□□□ -0.76
Sec61a1P61620 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms