Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.12□□□□□ -0.31
Rrp1P56183 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.12□□□□□ -0.31
Rrp1P56183 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rrp1P56183 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.12□□□□□ -0.31
Rrp1P56183 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rrp1P56183 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rrp1P56183 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.11□□□□□ -0.31
Rrp1P56183 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Rrp1P56183 Gm11930-201ENSMUST00000117788 190 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Gm11500-201ENSMUST00000118237 601 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.11□□□□□ -0.31
Rrp1P56183 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Gm5705-201ENSMUST00000066241 711 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rrp1P56183 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rrp1P56183 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.11□□□□□ -0.31
Rrp1P56183 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rrp1P56183 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.1□□□□□ -0.31
Rrp1P56183 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rrp1P56183 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.1□□□□□ -0.31
Rrp1P56183 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.1□□□□□ -0.31
Rrp1P56183 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rrp1P56183 Mir8093-201ENSMUST00000185043 137 ntBASIC13.1□□□□□ -0.31
Rrp1P56183 Gm6621-201ENSMUST00000193251 772 ntBASIC13.1□□□□□ -0.31
Rrp1P56183 Gm38341-201ENSMUST00000195357 515 ntBASIC13.1□□□□□ -0.31
Rrp1P56183 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.1□□□□□ -0.31
Rrp1P56183 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.1□□□□□ -0.31
Rrp1P56183 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rrp1P56183 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.1□□□□□ -0.31
Rrp1P56183 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Rrp1P56183 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.1□□□□□ -0.31
Rrp1P56183 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.1□□□□□ -0.31
Rrp1P56183 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rrp1P56183 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rrp1P56183 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rrp1P56183 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.09□□□□□ -0.31
Rrp1P56183 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rrp1P56183 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.09□□□□□ -0.31
Rrp1P56183 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms