Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NrlP54846 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NrlP54846 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
NrlP54846 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NrlP54846 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.41□□□□□ -0.42
NrlP54846 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.41□□□□□ -0.42
NrlP54846 Gm23218-201ENSMUST00000158124 276 ntBASIC12.41□□□□□ -0.42
NrlP54846 Gm5100-201ENSMUST00000195631 589 ntBASIC12.41□□□□□ -0.42
NrlP54846 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.41□□□□□ -0.42
NrlP54846 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NrlP54846 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.41□□□□□ -0.42
NrlP54846 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.41□□□□□ -0.42
NrlP54846 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NrlP54846 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.41□□□□□ -0.42
NrlP54846 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NrlP54846 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.41□□□□□ -0.42
NrlP54846 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NrlP54846 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
NrlP54846 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Rubie-203ENSMUST00000227803 2430 ntBASIC12.4□□□□□ -0.42
NrlP54846 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NrlP54846 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
NrlP54846 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Gm23272-201ENSMUST00000104053 129 ntBASIC12.4□□□□□ -0.42
NrlP54846 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
NrlP54846 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.4□□□□□ -0.42
NrlP54846 Gm22877-201ENSMUST00000175451 105 ntBASIC12.4□□□□□ -0.42
NrlP54846 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.4□□□□□ -0.42
NrlP54846 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Gm8574-201ENSMUST00000203207 924 ntBASIC12.4□□□□□ -0.42
NrlP54846 Gm45120-201ENSMUST00000208880 408 ntBASIC12.4□□□□□ -0.42
NrlP54846 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.4□□□□□ -0.42
NrlP54846 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.4□□□□□ -0.42
NrlP54846 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.4□□□□□ -0.42
NrlP54846 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
NrlP54846 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NrlP54846 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
NrlP54846 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Olfr584-201ENSMUST00000098210 964 ntBASIC12.4□□□□□ -0.42
NrlP54846 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NrlP54846 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NrlP54846 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.43
NrlP54846 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
NrlP54846 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.4□□□□□ -0.43
NrlP54846 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
NrlP54846 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NrlP54846 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NrlP54846 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms