Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.51□□□□□ -0.57
Pdx1P52946 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.51□□□□□ -0.57
Pdx1P52946 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Ntng1-201ENSMUST00000051253 327 ntBASIC11.51□□□□□ -0.57
Pdx1P52946 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pdx1P52946 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.51□□□□□ -0.57
Pdx1P52946 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdx1P52946 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pdx1P52946 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pdx1P52946 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.5□□□□□ -0.57
Pdx1P52946 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 Gm11941-201ENSMUST00000119904 610 ntBASIC11.5□□□□□ -0.57
Pdx1P52946 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Gm8459-201ENSMUST00000162504 760 ntBASIC11.5□□□□□ -0.57
Pdx1P52946 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 Gm43002-201ENSMUST00000200310 155 ntBASIC11.5□□□□□ -0.57
Pdx1P52946 Gm9555-201ENSMUST00000200908 583 ntBASIC11.5□□□□□ -0.57
Pdx1P52946 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.5□□□□□ -0.57
Pdx1P52946 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.5□□□□□ -0.57
Pdx1P52946 Gm1821-202ENSMUST00000227415 750 ntBASIC11.5□□□□□ -0.57
Pdx1P52946 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.5□□□□□ -0.57
Pdx1P52946 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdx1P52946 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pdx1P52946 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pdx1P52946 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Gm14071-201ENSMUST00000117817 509 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 Gm13809-201ENSMUST00000117921 597 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 Gm8731-201ENSMUST00000118088 412 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 Gm15566-201ENSMUST00000121130 590 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pdx1P52946 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pdx1P52946 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.49□□□□□ -0.57
Pdx1P52946 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdx1P52946 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 Gm18065-201ENSMUST00000221395 526 ntBASIC11.49□□□□□ -0.57
Pdx1P52946 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdx1P52946 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pdx1P52946 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pdx1P52946 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms