Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.31□□□□□ -0.44
Shmt1P50431 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.31□□□□□ -0.44
Shmt1P50431 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.31□□□□□ -0.44
Shmt1P50431 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.31□□□□□ -0.44
Shmt1P50431 Gm10731-201ENSMUST00000181171 448 ntBASIC12.31□□□□□ -0.44
Shmt1P50431 Gm27438-201ENSMUST00000183480 110 ntBASIC12.31□□□□□ -0.44
Shmt1P50431 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.31□□□□□ -0.44
Shmt1P50431 Gm43186-201ENSMUST00000198130 824 ntBASIC12.31□□□□□ -0.44
Shmt1P50431 Gm44551-201ENSMUST00000208804 171 ntBASIC12.31□□□□□ -0.44
Shmt1P50431 Gm4978-201ENSMUST00000071565 801 ntBASIC12.31□□□□□ -0.44
Shmt1P50431 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Shmt1P50431 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Shmt1P50431 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Erich3-203ENSMUST00000189969 3460 ntBASIC12.31□□□□□ -0.44
Shmt1P50431 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Shmt1P50431 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.31□□□□□ -0.44
Shmt1P50431 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.31□□□□□ -0.44
Shmt1P50431 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Shmt1P50431 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.31□□□□□ -0.44
Shmt1P50431 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Shmt1P50431 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Shmt1P50431 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Shmt1P50431 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Shmt1P50431 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Shmt1P50431 Gm12419-201ENSMUST00000116649 636 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Gm13888-201ENSMUST00000119148 422 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Gm12208-201ENSMUST00000122004 163 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Shmt1P50431 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.3□□□□□ -0.44
Shmt1P50431 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.3□□□□□ -0.44
Shmt1P50431 Gm2517-201ENSMUST00000215651 348 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.3□□□□□ -0.44
Shmt1P50431 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.3□□□□□ -0.44
Shmt1P50431 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Olfr584-201ENSMUST00000098210 964 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.3□□□□□ -0.44
Shmt1P50431 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Shmt1P50431 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.3□□□□□ -0.44
Shmt1P50431 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.3□□□□□ -0.44
Shmt1P50431 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Shmt1P50431 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Shmt1P50431 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Shmt1P50431 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Shmt1P50431 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Shmt1P50431 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Shmt1P50431 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.29□□□□□ -0.44
Shmt1P50431 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.29□□□□□ -0.44
Shmt1P50431 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.29□□□□□ -0.44
Shmt1P50431 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Shmt1P50431 Gm15881-201ENSMUST00000148792 942 ntBASIC12.29□□□□□ -0.44
Shmt1P50431 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt1P50431 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms