Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gli1P47806 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gli1P47806 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Gli1P47806 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gli1P47806 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.39□□□□□ -0.59
Gli1P47806 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.39□□□□□ -0.59
Gli1P47806 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Gli1P47806 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.39□□□□□ -0.59
Gli1P47806 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Gm13996-201ENSMUST00000118456 430 ntBASIC11.39□□□□□ -0.59
Gli1P47806 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.39□□□□□ -0.59
Gli1P47806 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Gli1P47806 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 AU022133-201ENSMUST00000200601 873 ntBASIC11.39□□□□□ -0.59
Gli1P47806 Gm45224-201ENSMUST00000208203 414 ntBASIC11.39□□□□□ -0.59
Gli1P47806 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.39□□□□□ -0.59
Gli1P47806 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Gli1P47806 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Gli1P47806 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Gm10312-201ENSMUST00000078515 489 ntBASIC11.39□□□□□ -0.59
Gli1P47806 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.39□□□□□ -0.59
Gli1P47806 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.39□□□□□ -0.59
Gli1P47806 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Gli1P47806 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gli1P47806 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Rgr-203ENSMUST00000225070 4704 ntBASIC11.38□□□□□ -0.59
Gli1P47806 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.38□□□□□ -0.59
Gli1P47806 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.38□□□□□ -0.59
Gli1P47806 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.38□□□□□ -0.59
Gli1P47806 Gm13296-201ENSMUST00000117854 997 ntBASIC11.38□□□□□ -0.59
Gli1P47806 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.38□□□□□ -0.59
Gli1P47806 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Gli1P47806 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.38□□□□□ -0.59
Gli1P47806 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 Rprl1-201ENSMUST00000158050 327 ntBASIC11.38□□□□□ -0.59
Gli1P47806 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.38□□□□□ -0.59
Gli1P47806 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Gm45433-201ENSMUST00000209386 247 ntBASIC11.38□□□□□ -0.59
Gli1P47806 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.38□□□□□ -0.59
Gli1P47806 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Gzmn-202ENSMUST00000225535 989 ntBASIC11.38□□□□□ -0.59
Gli1P47806 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.38□□□□□ -0.59
Gli1P47806 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Gli1P47806 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.38□□□□□ -0.59
Gli1P47806 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Gli1P47806 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gli1P47806 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gli1P47806 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gli1P47806 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gli1P47806 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms