Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rph3aP47708 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rph3aP47708 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rph3aP47708 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.32□□□□□ -0.6
Rph3aP47708 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rph3aP47708 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rph3aP47708 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm12380-201ENSMUST00000119012 544 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.31□□□□□ -0.6
Rph3aP47708 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm2383-201ENSMUST00000181461 807 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 Gm9192-201ENSMUST00000183221 985 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm18164-201ENSMUST00000213769 927 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 Gm18166-201ENSMUST00000215557 927 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.31□□□□□ -0.6
Rph3aP47708 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.31□□□□□ -0.6
Rph3aP47708 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.31□□□□□ -0.6
Rph3aP47708 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rph3aP47708 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.3□□□□□ -0.6
Rph3aP47708 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.3□□□□□ -0.6
Rph3aP47708 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.3□□□□□ -0.6
Rph3aP47708 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Rph3aP47708 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Rph3aP47708 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rph3aP47708 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Gm2260-201ENSMUST00000184965 657 ntBASIC11.3□□□□□ -0.6
Rph3aP47708 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.3□□□□□ -0.6
Rph3aP47708 Gm18730-201ENSMUST00000218038 343 ntBASIC11.3□□□□□ -0.6
Rph3aP47708 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.3□□□□□ -0.6
Rph3aP47708 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.3□□□□□ -0.6
Rph3aP47708 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.3□□□□□ -0.6
Rph3aP47708 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Rph3aP47708 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Rph3aP47708 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rph3aP47708 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rph3aP47708 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms