Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx1-2P42580 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx1-2P42580 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx1-2P42580 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx1-2P42580 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nkx1-2P42580 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.3□□□□□ -0.12
Nkx1-2P42580 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Gm15198-201ENSMUST00000117283 177 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Gm13097-201ENSMUST00000210722 397 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.29□□□□□ -0.12
Nkx1-2P42580 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx1-2P42580 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nkx1-2P42580 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nkx1-2P42580 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gm44967-201ENSMUST00000207047 631 ntBASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.28□□□□□ -0.12
Nkx1-2P42580 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.28□□□□□ -0.12
Nkx1-2P42580 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.28□□□□□ -0.12
Nkx1-2P42580 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.28□□□□□ -0.12
Nkx1-2P42580 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.28□□□□□ -0.12
Nkx1-2P42580 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.28□□□□□ -0.12
Nkx1-2P42580 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gm5705-201ENSMUST00000066241 711 ntBASIC14.28□□□□□ -0.12
Nkx1-2P42580 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx1-2P42580 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx1-2P42580 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx1-2P42580 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms