Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Fen1P39749 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fen1P39749 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fen1P39749 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Fen1P39749 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Fen1P39749 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Fen1P39749 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Fen1P39749 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Fen1P39749 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.71□□□□□ -0.53
Fen1P39749 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Gm23931-201ENSMUST00000103842 109 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Fen1P39749 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.71□□□□□ -0.53
Fen1P39749 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Gm24548-201ENSMUST00000158650 108 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Gm42627-201ENSMUST00000197347 224 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.71□□□□□ -0.53
Fen1P39749 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.71□□□□□ -0.53
Fen1P39749 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.71□□□□□ -0.53
Fen1P39749 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fen1P39749 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Fen1P39749 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.71□□□□□ -0.53
Fen1P39749 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Fen1P39749 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Fen1P39749 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Fen1P39749 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.71□□□□□ -0.54
Fen1P39749 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Fen1P39749 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.71□□□□□ -0.54
Fen1P39749 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fen1P39749 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Fen1P39749 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fen1P39749 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Fen1P39749 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Fen1P39749 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Fen1P39749 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.7□□□□□ -0.54
Fen1P39749 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Fen1P39749 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Gm13316-201ENSMUST00000140537 691 ntBASIC11.7□□□□□ -0.54
Fen1P39749 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.7□□□□□ -0.54
Fen1P39749 Gm38002-201ENSMUST00000193255 180 ntBASIC11.7□□□□□ -0.54
Fen1P39749 Gm43822-201ENSMUST00000200285 476 ntBASIC11.7□□□□□ -0.54
Fen1P39749 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.7□□□□□ -0.54
Fen1P39749 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.7□□□□□ -0.54
Fen1P39749 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.7□□□□□ -0.54
Fen1P39749 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Fen1P39749 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Fen1P39749 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Fen1P39749 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Fen1P39749 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Fen1P39749 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Fen1P39749 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fen1P39749 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.7□□□□□ -0.54
Fen1P39749 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms