Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm25053-202ENSMUST00000199731 132 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm43671-201ENSMUST00000200422 433 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm40879-201ENSMUST00000220759 612 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm5468-202ENSMUST00000227851 682 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Sftpa1P35242 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.77□□□□□ -0.69
Sftpa1P35242 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sftpa1P35242 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sftpa1P35242 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm12247-201ENSMUST00000117585 670 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.76□□□□□ -0.69
Sftpa1P35242 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm5340-201ENSMUST00000203733 880 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm6423-201ENSMUST00000204315 934 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.76□□□□□ -0.69
Sftpa1P35242 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sftpa1P35242 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.76□□□□□ -0.69
Sftpa1P35242 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm9673-201ENSMUST00000119287 781 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm14395-201ENSMUST00000120494 563 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm13445-201ENSMUST00000121664 307 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm15620-201ENSMUST00000122949 270 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm22846-201ENSMUST00000157706 270 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm17214-201ENSMUST00000164501 541 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm18801-201ENSMUST00000186616 536 ntBASIC10.75□□□□□ -0.69
Sftpa1P35242 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sftpa1P35242 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms