Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Mmp13P33435 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.92□□□□□ -0.5
Mmp13P33435 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.92□□□□□ -0.5
Mmp13P33435 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm9192-201ENSMUST00000183221 985 ntBASIC11.92□□□□□ -0.5
Mmp13P33435 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.92□□□□□ -0.5
Mmp13P33435 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm45186-201ENSMUST00000206874 478 ntBASIC11.92□□□□□ -0.5
Mmp13P33435 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.92□□□□□ -0.5
Mmp13P33435 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Mmp13P33435 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Mmp13P33435 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Mmp13P33435 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Mmp13P33435 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Mmp13P33435 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Mmp13P33435 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Mmp13P33435 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.91□□□□□ -0.5
Mmp13P33435 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Mmp13P33435 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Gm13996-201ENSMUST00000118456 430 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 Gm11960-201ENSMUST00000122068 925 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 Gm24990-201ENSMUST00000157406 323 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Mmp13P33435 Gm27627-201ENSMUST00000183644 150 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Mmp13P33435 Gm45433-201ENSMUST00000209386 247 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 Gm8913-201ENSMUST00000209491 641 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.91□□□□□ -0.5
Mmp13P33435 Lect2-202ENSMUST00000225183 823 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Mmp13P33435 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Erich3-203ENSMUST00000189969 3460 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Mmp13P33435 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Mmp13P33435 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Mmp13P33435 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.91□□□□□ -0.5
Mmp13P33435 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Mmp13P33435 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Mmp13P33435 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.9□□□□□ -0.5
Mmp13P33435 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Mmp13P33435 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 196.3 ms