Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nedd8P29595 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nedd8P29595 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nedd8P29595 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nedd8P29595 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nedd8P29595 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.7□□□□□ -0.7
Nedd8P29595 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.7□□□□□ -0.7
Nedd8P29595 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nedd8P29595 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nedd8P29595 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.7□□□□□ -0.7
Nedd8P29595 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.7□□□□□ -0.7
Nedd8P29595 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nedd8P29595 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nedd8P29595 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nedd8P29595 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Nedd8P29595 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Nedd8P29595 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Gm24934-201ENSMUST00000103764 111 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Gm8213-201ENSMUST00000118191 441 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Gm15610-201ENSMUST00000120584 195 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Gm14247-201ENSMUST00000120950 237 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Gm10156-201ENSMUST00000122364 462 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.69□□□□□ -0.7
Nedd8P29595 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.69□□□□□ -0.7
Nedd8P29595 Gm2495-201ENSMUST00000191160 466 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.69□□□□□ -0.7
Nedd8P29595 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.69□□□□□ -0.7
Nedd8P29595 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nedd8P29595 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nedd8P29595 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.69□□□□□ -0.7
Nedd8P29595 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nedd8P29595 Rims2-204ENSMUST00000226410 3685 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.69□□□□□ -0.7
Nedd8P29595 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.68□□□□□ -0.7
Nedd8P29595 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.68□□□□□ -0.7
Nedd8P29595 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nedd8P29595 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.68□□□□□ -0.7
Nedd8P29595 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Gm13612-201ENSMUST00000119276 390 ntBASIC10.68□□□□□ -0.7
Nedd8P29595 Gm12151-201ENSMUST00000121374 290 ntBASIC10.68□□□□□ -0.7
Nedd8P29595 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.68□□□□□ -0.7
Nedd8P29595 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.68□□□□□ -0.7
Nedd8P29595 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.68□□□□□ -0.7
Nedd8P29595 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.68□□□□□ -0.7
Nedd8P29595 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nedd8P29595 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nedd8P29595 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nedd8P29595 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nedd8P29595 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nedd8P29595 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nedd8P29595 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.67□□□□□ -0.7
Nedd8P29595 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms