Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Vcam1P29533 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.34□□□□□ -0.27
Vcam1P29533 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.34□□□□□ -0.27
Vcam1P29533 Gm11340-201ENSMUST00000119226 412 ntBASIC13.34□□□□□ -0.27
Vcam1P29533 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.34□□□□□ -0.27
Vcam1P29533 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vcam1P29533 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vcam1P29533 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Gm9135-201ENSMUST00000182963 990 ntBASIC13.34□□□□□ -0.27
Vcam1P29533 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Gm30946-201ENSMUST00000198288 724 ntBASIC13.34□□□□□ -0.27
Vcam1P29533 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.34□□□□□ -0.27
Vcam1P29533 Mt1-202ENSMUST00000211807 1085 ntBASIC13.34□□□□□ -0.27
Vcam1P29533 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vcam1P29533 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.34□□□□□ -0.27
Vcam1P29533 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Vcam1P29533 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcam1P29533 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.33□□□□□ -0.28
Vcam1P29533 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.33□□□□□ -0.28
Vcam1P29533 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Vcam1P29533 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vcam1P29533 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Vcam1P29533 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vcam1P29533 Gm22877-201ENSMUST00000175451 105 ntBASIC13.33□□□□□ -0.28
Vcam1P29533 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.33□□□□□ -0.28
Vcam1P29533 Gm18776-201ENSMUST00000188833 654 ntBASIC13.33□□□□□ -0.28
Vcam1P29533 Gm44323-201ENSMUST00000198689 129 ntBASIC13.33□□□□□ -0.28
Vcam1P29533 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.33□□□□□ -0.28
Vcam1P29533 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.33□□□□□ -0.28
Vcam1P29533 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Vcam1P29533 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcam1P29533 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vcam1P29533 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.32□□□□□ -0.28
Vcam1P29533 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.32□□□□□ -0.28
Vcam1P29533 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vcam1P29533 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.32□□□□□ -0.28
Vcam1P29533 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Gm9673-201ENSMUST00000119287 781 ntBASIC13.32□□□□□ -0.28
Vcam1P29533 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Gm8723-201ENSMUST00000166076 820 ntBASIC13.32□□□□□ -0.28
Vcam1P29533 Gm8701-201ENSMUST00000169259 874 ntBASIC13.32□□□□□ -0.28
Vcam1P29533 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vcam1P29533 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms