Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col8a2P25318 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.71□□□□□ -0.85
Col8a2P25318 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Col8a2P25318 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Col8a2P25318 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Gm14071-201ENSMUST00000117817 509 ntBASIC9.71□□□□□ -0.86
Col8a2P25318 Gm15131-201ENSMUST00000119124 595 ntBASIC9.71□□□□□ -0.86
Col8a2P25318 Gm7150-201ENSMUST00000122032 981 ntBASIC9.71□□□□□ -0.86
Col8a2P25318 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Col8a2P25318 Gm6114-201ENSMUST00000182472 968 ntBASIC9.71□□□□□ -0.86
Col8a2P25318 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.71□□□□□ -0.86
Col8a2P25318 Gm43520-201ENSMUST00000197996 164 ntBASIC9.71□□□□□ -0.86
Col8a2P25318 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.71□□□□□ -0.86
Col8a2P25318 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.71□□□□□ -0.86
Col8a2P25318 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.71□□□□□ -0.86
Col8a2P25318 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Col8a2P25318 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.71□□□□□ -0.86
Col8a2P25318 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.71□□□□□ -0.86
Col8a2P25318 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC9.71□□□□□ -0.86
Col8a2P25318 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.86
Col8a2P25318 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.71□□□□□ -0.86
Col8a2P25318 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Col8a2P25318 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col8a2P25318 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Col8a2P25318 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Gm14585-201ENSMUST00000120713 634 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.7□□□□□ -0.86
Col8a2P25318 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.7□□□□□ -0.86
Col8a2P25318 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Gm12407-201ENSMUST00000180219 324 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col8a2P25318 Gm3508-201ENSMUST00000186012 792 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Gm28388-201ENSMUST00000186262 437 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Gm17831-201ENSMUST00000205579 900 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.7□□□□□ -0.86
Col8a2P25318 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col8a2P25318 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col8a2P25318 Olfr584-201ENSMUST00000098210 964 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.7□□□□□ -0.86
Col8a2P25318 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Col8a2P25318 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Col8a2P25318 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.7□□□□□ -0.86
Col8a2P25318 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC9.7□□□□□ -0.86
Col8a2P25318 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Col8a2P25318 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col8a2P25318 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.7□□□□□ -0.86
Col8a2P25318 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.7□□□□□ -0.86
Col8a2P25318 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col8a2P25318 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms