Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Gm8302-201ENSMUST00000119217 852 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 Gm12791-201ENSMUST00000120788 655 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 Gm11980-201ENSMUST00000121445 986 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Gm22993-201ENSMUST00000175423 254 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Gm45120-201ENSMUST00000208880 408 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hoxd8P23463 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.08□□□□□ -0.48
Hoxd8P23463 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hoxd8P23463 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Hoxd8P23463 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.07□□□□□ -0.48
Hoxd8P23463 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm9135-201ENSMUST00000182963 990 ntBASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm45527-201ENSMUST00000211052 774 ntBASIC12.07□□□□□ -0.48
Hoxd8P23463 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.07□□□□□ -0.48
Hoxd8P23463 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm16380-201ENSMUST00000077997 478 ntBASIC12.07□□□□□ -0.48
Hoxd8P23463 Mir483-201ENSMUST00000093631 73 ntBASIC12.07□□□□□ -0.48
Hoxd8P23463 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hoxd8P23463 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxd8P23463 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Hoxd8P23463 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.06□□□□□ -0.48
Hoxd8P23463 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hoxd8P23463 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hoxd8P23463 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxd8P23463 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms