Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.04□□□□□ -0.48
Rb1P13405 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.04□□□□□ -0.48
Rb1P13405 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Rb1P13405 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.04□□□□□ -0.48
Rb1P13405 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rb1P13405 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rb1P13405 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Rb1P13405 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rb1P13405 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.03□□□□□ -0.48
Rb1P13405 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rb1P13405 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rb1P13405 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.03□□□□□ -0.48
Rb1P13405 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Rb1P13405 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.03□□□□□ -0.48
Rb1P13405 Gm14460-201ENSMUST00000121511 639 ntBASIC12.03□□□□□ -0.48
Rb1P13405 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.03□□□□□ -0.48
Rb1P13405 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.03□□□□□ -0.48
Rb1P13405 Gm15881-201ENSMUST00000148792 942 ntBASIC12.03□□□□□ -0.48
Rb1P13405 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.03□□□□□ -0.48
Rb1P13405 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.03□□□□□ -0.48
Rb1P13405 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.03□□□□□ -0.48
Rb1P13405 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.03□□□□□ -0.48
Rb1P13405 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.03□□□□□ -0.48
Rb1P13405 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rb1P13405 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rb1P13405 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rb1P13405 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rb1P13405 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rb1P13405 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rb1P13405 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.03□□□□□ -0.48
Rb1P13405 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.03□□□□□ -0.48
Rb1P13405 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rb1P13405 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.03□□□□□ -0.48
Rb1P13405 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.03□□□□□ -0.48
Rb1P13405 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rb1P13405 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rb1P13405 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.03□□□□□ -0.48
Rb1P13405 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.02□□□□□ -0.48
Rb1P13405 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rb1P13405 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rb1P13405 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rb1P13405 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Rb1P13405 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.02□□□□□ -0.48
Rb1P13405 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rb1P13405 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rb1P13405 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.02□□□□□ -0.48
Rb1P13405 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rb1P13405 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rb1P13405 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rb1P13405 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Rb1P13405 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms