Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm38273-201ENSMUST00000194987 2382 ntBASIC17.3■□□□□ 0.36
NclP09405 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NclP09405 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NclP09405 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC17.3■□□□□ 0.36
NclP09405 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NclP09405 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC17.29■□□□□ 0.36
NclP09405 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Gm13384-201ENSMUST00000117166 1344 ntBASIC17.29■□□□□ 0.36
NclP09405 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC17.29■□□□□ 0.36
NclP09405 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
NclP09405 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC17.29■□□□□ 0.36
NclP09405 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NclP09405 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.29■□□□□ 0.36
NclP09405 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC17.29■□□□□ 0.36
NclP09405 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC17.29■□□□□ 0.36
NclP09405 AC124433.1-201ENSMUST00000224483 1063 ntBASIC17.29■□□□□ 0.36
NclP09405 AC140293.1-201ENSMUST00000225626 1247 ntBASIC17.29■□□□□ 0.36
NclP09405 AC118639.2-201ENSMUST00000226289 223 ntBASIC17.29■□□□□ 0.36
NclP09405 Gm4978-201ENSMUST00000071565 801 ntBASIC17.29■□□□□ 0.36
NclP09405 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC17.29■□□□□ 0.36
NclP09405 Gm5451-201ENSMUST00000080545 579 ntBASIC17.29■□□□□ 0.36
NclP09405 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NclP09405 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Gm13722-201ENSMUST00000117964 3066 ntBASIC17.28■□□□□ 0.36
NclP09405 Gm4780-202ENSMUST00000215200 2644 ntBASIC17.28■□□□□ 0.36
NclP09405 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NclP09405 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC17.28■□□□□ 0.36
NclP09405 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Gm11244-201ENSMUST00000121243 237 ntBASIC17.28■□□□□ 0.36
NclP09405 Gm8194-201ENSMUST00000159783 859 ntBASIC17.28■□□□□ 0.36
NclP09405 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
NclP09405 Gm44329-201ENSMUST00000197469 112 ntBASIC17.28■□□□□ 0.36
NclP09405 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC17.28■□□□□ 0.36
NclP09405 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Gm9661-201ENSMUST00000221611 1122 ntBASIC17.28■□□□□ 0.36
NclP09405 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NclP09405 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.28■□□□□ 0.36
NclP09405 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NclP09405 Gm13347-201ENSMUST00000120298 1353 ntBASIC17.28■□□□□ 0.36
NclP09405 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
NclP09405 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
NclP09405 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
NclP09405 Gm23272-201ENSMUST00000104053 129 ntBASIC17.27■□□□□ 0.36
NclP09405 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NclP09405 Gm12856-201ENSMUST00000119471 1293 ntBASIC17.27■□□□□ 0.36
NclP09405 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
NclP09405 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NclP09405 Gm34023-201ENSMUST00000195539 217 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms