Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.76□□□□□ -0.21
Col3a1P08121 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.76□□□□□ -0.21
Col3a1P08121 Gm10254-201ENSMUST00000052888 867 ntBASIC13.76□□□□□ -0.21
Col3a1P08121 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col3a1P08121 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col3a1P08121 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.76□□□□□ -0.21
Col3a1P08121 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Col3a1P08121 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Btrc-209ENSMUST00000224478 2194 ntBASIC13.76□□□□□ -0.21
Col3a1P08121 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.75□□□□□ -0.21
Col3a1P08121 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.75□□□□□ -0.21
Col3a1P08121 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Col3a1P08121 Gm24809-201ENSMUST00000175318 271 ntBASIC13.75□□□□□ -0.21
Col3a1P08121 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Gm43671-201ENSMUST00000200422 433 ntBASIC13.75□□□□□ -0.21
Col3a1P08121 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.75□□□□□ -0.21
Col3a1P08121 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.75□□□□□ -0.21
Col3a1P08121 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.75□□□□□ -0.21
Col3a1P08121 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col3a1P08121 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Col3a1P08121 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm12389-201ENSMUST00000117696 418 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.74□□□□□ -0.21
Col3a1P08121 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm18463-201ENSMUST00000207258 474 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Gm18460-201ENSMUST00000208088 464 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col3a1P08121 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col3a1P08121 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Col3a1P08121 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.74□□□□□ -0.21
Col3a1P08121 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.74□□□□□ -0.21
Col3a1P08121 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col3a1P08121 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col3a1P08121 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col3a1P08121 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col3a1P08121 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.73□□□□□ -0.21
Col3a1P08121 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col3a1P08121 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col3a1P08121 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col3a1P08121 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms