Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.81□□□□□ -0.84
Hoxa3P02831 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.8□□□□□ -0.84
Hoxa3P02831 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.8□□□□□ -0.84
Hoxa3P02831 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm11663-201ENSMUST00000117888 290 ntBASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm37444-201ENSMUST00000193605 439 ntBASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm5051-201ENSMUST00000204085 485 ntBASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm44126-201ENSMUST00000204831 514 ntBASIC9.8□□□□□ -0.84
Hoxa3P02831 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm45575-201ENSMUST00000210283 548 ntBASIC9.8□□□□□ -0.84
Hoxa3P02831 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Hoxa3P02831 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxa3P02831 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.79□□□□□ -0.84
Hoxa3P02831 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.79□□□□□ -0.84
Hoxa3P02831 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Hoxa3P02831 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hoxa3P02831 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Hoxa3P02831 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Hoxa3P02831 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms