Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm12579-201ENSMUST00000118040 783 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm8199-201ENSMUST00000121323 823 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm7150-201ENSMUST00000122032 981 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm17040-202ENSMUST00000170597 889 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm2260-201ENSMUST00000184965 657 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm4482-201ENSMUST00000200876 742 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm10288-201ENSMUST00000084614 537 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Btrc-209ENSMUST00000224478 2194 ntBASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Igh-VJ558P01758 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm15808-201ENSMUST00000119046 604 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm12266-201ENSMUST00000120311 962 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm13263-201ENSMUST00000121271 838 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm23085-201ENSMUST00000157849 293 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm27552-201ENSMUST00000183351 62 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm27844-201ENSMUST00000183613 62 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm5733-201ENSMUST00000190232 939 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm44008-201ENSMUST00000204345 412 ntBASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Igh-VJ558P01758 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms