Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CopeO89079 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.97□□□□□ -0.49
CopeO89079 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
CopeO89079 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.97□□□□□ -0.49
CopeO89079 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.97□□□□□ -0.49
CopeO89079 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Gm11424-201ENSMUST00000121929 829 ntBASIC11.97□□□□□ -0.49
CopeO89079 Gm15547-201ENSMUST00000122152 333 ntBASIC11.97□□□□□ -0.49
CopeO89079 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.97□□□□□ -0.49
CopeO89079 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.97□□□□□ -0.49
CopeO89079 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.97□□□□□ -0.49
CopeO89079 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.97□□□□□ -0.49
CopeO89079 Gm19187-201ENSMUST00000206781 892 ntBASIC11.97□□□□□ -0.49
CopeO89079 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 Gm18065-201ENSMUST00000221395 526 ntBASIC11.97□□□□□ -0.49
CopeO89079 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.97□□□□□ -0.49
CopeO89079 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.97□□□□□ -0.49
CopeO89079 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CopeO89079 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.97□□□□□ -0.49
CopeO89079 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CopeO89079 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CopeO89079 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
CopeO89079 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.96□□□□□ -0.49
CopeO89079 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
CopeO89079 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.96□□□□□ -0.49
CopeO89079 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CopeO89079 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
CopeO89079 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
CopeO89079 Gm5187-201ENSMUST00000117317 991 ntBASIC11.96□□□□□ -0.49
CopeO89079 Gm15004-201ENSMUST00000119192 630 ntBASIC11.96□□□□□ -0.49
CopeO89079 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.96□□□□□ -0.49
CopeO89079 Gm11793-201ENSMUST00000120433 981 ntBASIC11.96□□□□□ -0.49
CopeO89079 Gm13786-201ENSMUST00000122371 333 ntBASIC11.96□□□□□ -0.49
CopeO89079 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.96□□□□□ -0.49
CopeO89079 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.96□□□□□ -0.49
CopeO89079 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CopeO89079 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.96□□□□□ -0.49
CopeO89079 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Gm19309-201ENSMUST00000218295 205 ntBASIC11.96□□□□□ -0.49
CopeO89079 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
CopeO89079 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CopeO89079 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CopeO89079 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms