Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Hcn1O88704 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hcn1O88704 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hcn1O88704 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm5616-201ENSMUST00000165252 384 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm8741-201ENSMUST00000174736 384 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm29615-201ENSMUST00000185371 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm28224-201ENSMUST00000186078 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm29001-201ENSMUST00000186177 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm28292-201ENSMUST00000186593 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm28101-201ENSMUST00000187608 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm29076-201ENSMUST00000187689 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm28302-201ENSMUST00000187931 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm28646-201ENSMUST00000188220 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm28205-201ENSMUST00000189177 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm29032-201ENSMUST00000189797 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm28695-201ENSMUST00000190300 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm37448-201ENSMUST00000192795 697 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 AY036118-201ENSMUST00000200021 923 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.18□□□□□ -0.62
Hcn1O88704 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.18□□□□□ -0.62
Hcn1O88704 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.18□□□□□ -0.62
Hcn1O88704 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.18□□□□□ -0.62
Hcn1O88704 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hcn1O88704 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Hcn1O88704 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Hcn1O88704 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hcn1O88704 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Hcn1O88704 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hcn1O88704 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.17□□□□□ -0.62
Hcn1O88704 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.17□□□□□ -0.62
Hcn1O88704 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.17□□□□□ -0.62
Hcn1O88704 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.17□□□□□ -0.62
Hcn1O88704 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Hcn1O88704 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms