Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Npc1O35604 Gm22902-201ENSMUST00000158488 302 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Gm4310-201ENSMUST00000177847 889 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Gm19353-201ENSMUST00000184561 445 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Gm10774-201ENSMUST00000188689 204 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Gm29499-201ENSMUST00000189151 486 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Gm28329-201ENSMUST00000191208 689 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Gm29171-201ENSMUST00000191397 486 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Gm6450-201ENSMUST00000200896 574 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.39□□□□□ -0.59
Npc1O35604 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Ginm1-202ENSMUST00000065124 300 ntBASIC11.39□□□□□ -0.59
Npc1O35604 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Npc1O35604 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Npc1O35604 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.39□□□□□ -0.59
Npc1O35604 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.38□□□□□ -0.59
Npc1O35604 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Npc1O35604 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.38□□□□□ -0.59
Npc1O35604 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Gm13611-201ENSMUST00000118269 318 ntBASIC11.38□□□□□ -0.59
Npc1O35604 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.38□□□□□ -0.59
Npc1O35604 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Npc1O35604 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Npc1O35604 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.38□□□□□ -0.59
Npc1O35604 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.38□□□□□ -0.59
Npc1O35604 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.38□□□□□ -0.59
Npc1O35604 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.38□□□□□ -0.59
Npc1O35604 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.38□□□□□ -0.59
Npc1O35604 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Npc1O35604 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.38□□□□□ -0.59
Npc1O35604 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Npc1O35604 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.38□□□□□ -0.59
Npc1O35604 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Npc1O35604 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Npc1O35604 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Npc1O35604 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Npc1O35604 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Npc1O35604 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npc1O35604 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Npc1O35604 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.37□□□□□ -0.59
Npc1O35604 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Npc1O35604 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Npc1O35604 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Npc1O35604 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Npc1O35604 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Npc1O35604 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.37□□□□□ -0.59
Npc1O35604 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Npc1O35604 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms