Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prrt1O35449 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prrt1O35449 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Prrt1O35449 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prrt1O35449 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Prrt1O35449 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.82□□□□□ -0.84
Prrt1O35449 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Prrt1O35449 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Prrt1O35449 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.82□□□□□ -0.84
Prrt1O35449 Mir1894-201ENSMUST00000122802 81 ntBASIC9.82□□□□□ -0.84
Prrt1O35449 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.82□□□□□ -0.84
Prrt1O35449 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Prrt1O35449 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.82□□□□□ -0.84
Prrt1O35449 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.82□□□□□ -0.84
Prrt1O35449 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.82□□□□□ -0.84
Prrt1O35449 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.82□□□□□ -0.84
Prrt1O35449 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Prrt1O35449 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.82□□□□□ -0.84
Prrt1O35449 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Prrt1O35449 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Prrt1O35449 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Prrt1O35449 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Prrt1O35449 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Prrt1O35449 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.82□□□□□ -0.84
Prrt1O35449 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prrt1O35449 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.82□□□□□ -0.84
Prrt1O35449 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Prrt1O35449 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Prrt1O35449 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Prrt1O35449 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Prrt1O35449 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.81□□□□□ -0.84
Prrt1O35449 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Prrt1O35449 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.81□□□□□ -0.84
Prrt1O35449 Gm5419-201ENSMUST00000119301 527 ntBASIC9.81□□□□□ -0.84
Prrt1O35449 Gm11814-201ENSMUST00000119515 929 ntBASIC9.81□□□□□ -0.84
Prrt1O35449 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.81□□□□□ -0.84
Prrt1O35449 Gm8738-201ENSMUST00000172606 329 ntBASIC9.81□□□□□ -0.84
Prrt1O35449 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.81□□□□□ -0.84
Prrt1O35449 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Prrt1O35449 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Prrt1O35449 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.81□□□□□ -0.84
Prrt1O35449 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Prrt1O35449 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms