Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ebf3O08791 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ebf3O08791 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ebf3O08791 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ebf3O08791 Gm16071-201ENSMUST00000119589 793 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Gm15610-201ENSMUST00000120584 195 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Gm12516-201ENSMUST00000120819 385 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.14□□□□□ -0.47
Ebf3O08791 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Gm23153-201ENSMUST00000175323 313 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Gm9630-201ENSMUST00000178304 885 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Gm10731-201ENSMUST00000181171 448 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Gm29155-201ENSMUST00000185910 269 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Gm17826-201ENSMUST00000189720 798 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.14□□□□□ -0.47
Ebf3O08791 Gm6867-201ENSMUST00000219165 425 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ebf3O08791 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.14□□□□□ -0.47
Ebf3O08791 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.14□□□□□ -0.47
Ebf3O08791 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.14□□□□□ -0.47
Ebf3O08791 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ebf3O08791 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ebf3O08791 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ebf3O08791 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf3O08791 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.13□□□□□ -0.47
Ebf3O08791 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Ebf3O08791 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ebf3O08791 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm5706-201ENSMUST00000181525 993 ntBASIC12.13□□□□□ -0.47
Ebf3O08791 Gm37905-201ENSMUST00000195310 341 ntBASIC12.13□□□□□ -0.47
Ebf3O08791 Gm44329-201ENSMUST00000197469 112 ntBASIC12.13□□□□□ -0.47
Ebf3O08791 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm35960-201ENSMUST00000202712 767 ntBASIC12.13□□□□□ -0.47
Ebf3O08791 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.13□□□□□ -0.47
Ebf3O08791 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.13□□□□□ -0.47
Ebf3O08791 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf3O08791 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.13□□□□□ -0.47
Ebf3O08791 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm2553-201ENSMUST00000215986 605 ntBASIC12.13□□□□□ -0.47
Ebf3O08791 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ebf3O08791 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.13□□□□□ -0.47
Ebf3O08791 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.13□□□□□ -0.47
Ebf3O08791 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms