Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.64□□□□□ -0.23
Tcof1O08784 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Tcof1O08784 Gm11700-201ENSMUST00000119409 403 ntBASIC13.64□□□□□ -0.23
Tcof1O08784 Gm11836-201ENSMUST00000121022 441 ntBASIC13.64□□□□□ -0.23
Tcof1O08784 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Gm15881-201ENSMUST00000148792 942 ntBASIC13.64□□□□□ -0.23
Tcof1O08784 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Tcof1O08784 Gm10807-201ENSMUST00000177134 795 ntBASIC13.64□□□□□ -0.23
Tcof1O08784 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.64□□□□□ -0.23
Tcof1O08784 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Gm8365-201ENSMUST00000197334 648 ntBASIC13.64□□□□□ -0.23
Tcof1O08784 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.64□□□□□ -0.23
Tcof1O08784 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tcof1O08784 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.63□□□□□ -0.23
Tcof1O08784 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.63□□□□□ -0.23
Tcof1O08784 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.63□□□□□ -0.23
Tcof1O08784 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.63□□□□□ -0.23
Tcof1O08784 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tcof1O08784 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.63□□□□□ -0.23
Tcof1O08784 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.63□□□□□ -0.23
Tcof1O08784 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Tcof1O08784 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.63□□□□□ -0.23
Tcof1O08784 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.63□□□□□ -0.23
Tcof1O08784 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.63□□□□□ -0.23
Tcof1O08784 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.63□□□□□ -0.23
Tcof1O08784 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.63□□□□□ -0.23
Tcof1O08784 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tcof1O08784 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tcof1O08784 Gm43186-201ENSMUST00000198130 824 ntBASIC13.63□□□□□ -0.23
Tcof1O08784 Gm44506-201ENSMUST00000206278 965 ntBASIC13.63□□□□□ -0.23
Tcof1O08784 Gm45550-201ENSMUST00000209380 946 ntBASIC13.63□□□□□ -0.23
Tcof1O08784 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Tcof1O08784 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Tcof1O08784 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tcof1O08784 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tcof1O08784 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.62□□□□□ -0.23
Tcof1O08784 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Tcof1O08784 Gm11949-201ENSMUST00000117640 372 ntBASIC13.62□□□□□ -0.23
Tcof1O08784 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.62□□□□□ -0.23
Tcof1O08784 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.62□□□□□ -0.23
Tcof1O08784 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Tcof1O08784 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.62□□□□□ -0.23
Tcof1O08784 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.62□□□□□ -0.23
Tcof1O08784 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Gm6108-201ENSMUST00000208365 367 ntBASIC13.62□□□□□ -0.23
Tcof1O08784 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.62□□□□□ -0.23
Tcof1O08784 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Tcof1O08784 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tcof1O08784 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tcof1O08784 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tcof1O08784 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tcof1O08784 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tcof1O08784 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tcof1O08784 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms