Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm13665-201ENSMUST00000120830 528 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm25700-201ENSMUST00000177693 110 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm4310-201ENSMUST00000177847 889 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm8343-201ENSMUST00000182705 994 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gm4157-201ENSMUST00000211647 679 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh9F8VPK8 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm5616-201ENSMUST00000165252 384 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm8741-201ENSMUST00000174736 384 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Mir6420-201ENSMUST00000185032 102 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm45224-201ENSMUST00000208203 414 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Gm17827-201ENSMUST00000211825 742 ntBASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh9F8VPK8 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh9F8VPK8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms