Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh1F7BJK1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm12015-201ENSMUST00000117065 843 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm11989-201ENSMUST00000117240 672 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm11362-201ENSMUST00000118838 850 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm27572-201ENSMUST00000183702 255 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Mir7085-201ENSMUST00000184353 66 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm6439-201ENSMUST00000199849 862 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm19287-201ENSMUST00000203190 358 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm19309-201ENSMUST00000218295 205 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh1F7BJK1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm37489-201ENSMUST00000191883 159 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm43371-201ENSMUST00000202838 1031 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm6013-201ENSMUST00000212264 699 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gm10478-201ENSMUST00000084451 396 ntBASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh1F7BJK1 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms