Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Gm44740-201ENSMUST00000205603 1614 ntBASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Gm8152-201ENSMUST00000120842 637 ntBASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Gm4917-201ENSMUST00000121452 650 ntBASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hfm1D3Z4R1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm2345-201ENSMUST00000193451 589 ntBASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm43564-201ENSMUST00000196185 211 ntBASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm6518-201ENSMUST00000208450 342 ntBASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm18001-201ENSMUST00000212023 688 ntBASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 AC121567.1-201ENSMUST00000227213 842 ntBASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.12■□□□□ 0.17
Hfm1D3Z4R1 Gm38192-201ENSMUST00000194364 1847 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm6758-201ENSMUST00000119643 1055 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm16305-201ENSMUST00000140747 556 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm20493-201ENSMUST00000173706 213 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm7572-201ENSMUST00000182616 766 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 AC129975.1-201ENSMUST00000224816 592 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm7104-201ENSMUST00000179741 2532 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm23604-201ENSMUST00000104311 132 ntBASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC16.11■□□□□ 0.17
Hfm1D3Z4R1 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms