Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Shank1D3YZU1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Gm11783-201ENSMUST00000119549 885 ntBASIC10.46□□□□□ -0.74
Shank1D3YZU1 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.46□□□□□ -0.74
Shank1D3YZU1 Gm9135-201ENSMUST00000182963 990 ntBASIC10.46□□□□□ -0.74
Shank1D3YZU1 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.46□□□□□ -0.74
Shank1D3YZU1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.46□□□□□ -0.74
Shank1D3YZU1 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.46□□□□□ -0.74
Shank1D3YZU1 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.46□□□□□ -0.74
Shank1D3YZU1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.46□□□□□ -0.74
Shank1D3YZU1 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.45□□□□□ -0.74
Shank1D3YZU1 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.45□□□□□ -0.74
Shank1D3YZU1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.45□□□□□ -0.74
Shank1D3YZU1 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm12663-201ENSMUST00000118481 958 ntBASIC10.45□□□□□ -0.74
Shank1D3YZU1 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 BC106175-202ENSMUST00000219344 1213 ntBASIC10.45□□□□□ -0.74
Shank1D3YZU1 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Olfr584-201ENSMUST00000098210 964 ntBASIC10.45□□□□□ -0.74
Shank1D3YZU1 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Shank1D3YZU1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shank1D3YZU1 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms