Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm8502-201ENSMUST00000185708 901 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm21147-201ENSMUST00000186046 913 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm8510-201ENSMUST00000189202 895 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm2316-201ENSMUST00000190613 921 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm6546-201ENSMUST00000192096 766 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm44651-201ENSMUST00000207343 372 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gzmn-202ENSMUST00000225535 989 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 AC102523.2-201ENSMUST00000227813 983 ntBASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim30cD3YVI9 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm15236-201ENSMUST00000117309 379 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm6963-201ENSMUST00000147879 379 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm5070-201ENSMUST00000177599 862 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm45359-201ENSMUST00000210635 427 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim30cD3YVI9 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.79□□□□□ -0.36
Trim30cD3YVI9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim30cD3YVI9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms