Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tubb1A2AQ07 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm23596-201ENSMUST00000104304 132 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm12857-201ENSMUST00000117678 592 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm15207-201ENSMUST00000119259 442 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm20495-201ENSMUST00000173902 235 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm28071-201ENSMUST00000190355 478 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm18038-201ENSMUST00000197900 485 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Gm6867-201ENSMUST00000219165 425 ntBASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tubb1A2AQ07 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tubb1A2AQ07 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.9□□□□□ -0.51
Tubb1A2AQ07 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Gm14130-201ENSMUST00000118417 987 ntBASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Rps4l-202ENSMUST00000204242 789 ntBASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tubb1A2AQ07 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tubb1A2AQ07 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms