Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Gm8956-201ENSMUST00000203939 825 ntBASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.91□□□□□ -0.82
Gm3550W4VSN7 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Gm3550W4VSN7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Gm13296-201ENSMUST00000117854 997 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Mir1938-201ENSMUST00000158746 100 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 AA914427-201ENSMUST00000193194 1166 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Gm38317-201ENSMUST00000195564 343 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Gm43179-201ENSMUST00000198797 275 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Gm43962-201ENSMUST00000203898 190 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Gm3550W4VSN7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm3550W4VSN7 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm3550W4VSN7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Rgr-203ENSMUST00000225070 4704 ntBASIC9.9□□□□□ -0.83
Gm3550W4VSN7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm3550W4VSN7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm3550W4VSN7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Gm3550W4VSN7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm3550W4VSN7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Gm3550W4VSN7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.89□□□□□ -0.83
Gm3550W4VSN7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms