Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb2S4R1M3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb2S4R1M3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb2S4R1M3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb2S4R1M3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
H2afb2S4R1M3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
H2afb2S4R1M3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm11500-201ENSMUST00000118237 601 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm11783-201ENSMUST00000119549 885 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm8566-201ENSMUST00000120174 465 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm12196-201ENSMUST00000120954 262 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm25881-201ENSMUST00000157783 103 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Mir6420-201ENSMUST00000185032 102 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm4857-201ENSMUST00000192718 785 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H2afb2S4R1M3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm14724-201ENSMUST00000118400 537 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm14208-201ENSMUST00000119645 678 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm14017-201ENSMUST00000121934 386 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm8815-201ENSMUST00000173809 620 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H2afb2S4R1M3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms