Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm14127-201ENSMUST00000117906 678 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm13665-201ENSMUST00000120830 528 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Gm43758-201ENSMUST00000199500 367 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 BC043934-202ENSMUST00000185694 2356 ntBASIC11.34□□□□□ -0.59
Cdh17Q9R100 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh17Q9R100 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh17Q9R100 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdh17Q9R100 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdh17Q9R100 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cdh17Q9R100 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdh17Q9R100 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm14071-201ENSMUST00000117817 509 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm14381-201ENSMUST00000122105 414 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm3329-201ENSMUST00000159873 556 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm20482-202ENSMUST00000174729 825 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm43184-201ENSMUST00000197247 542 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 AY036118-201ENSMUST00000200021 923 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm17812-201ENSMUST00000204935 318 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.33□□□□□ -0.6
Cdh17Q9R100 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh17Q9R100 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh17Q9R100 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh17Q9R100 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh17Q9R100 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdh17Q9R100 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh17Q9R100 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh17Q9R100 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms