Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Gm17040-202ENSMUST00000170597 889 ntBASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Gm28071-201ENSMUST00000190355 478 ntBASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubb3Q9ERD7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Btrc-209ENSMUST00000224478 2194 ntBASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm5616-201ENSMUST00000165252 384 ntBASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm8741-201ENSMUST00000174736 384 ntBASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm43378-201ENSMUST00000199336 582 ntBASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Gm43962-201ENSMUST00000203898 190 ntBASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms