Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Mmp1bQ9EPL6 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Mmp1bQ9EPL6 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Mmp1bQ9EPL6 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Mmp1bQ9EPL6 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Mmp1bQ9EPL6 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Mmp1bQ9EPL6 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Mmp1bQ9EPL6 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Mmp1bQ9EPL6 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Gm11222-201ENSMUST00000119005 738 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Gm19994-201ENSMUST00000217086 586 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Gm807-202ENSMUST00000224929 408 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Lect2-202ENSMUST00000225183 823 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Mmp1bQ9EPL6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Gm5419-201ENSMUST00000119301 527 ntBASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Gm6114-201ENSMUST00000182472 968 ntBASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Mmp1bQ9EPL6 Gm9996-201ENSMUST00000070359 913 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms