Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm12247-201ENSMUST00000117585 670 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm12036-201ENSMUST00000120008 530 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm13022-201ENSMUST00000121181 285 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm11980-201ENSMUST00000121445 986 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm7504-201ENSMUST00000201449 424 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm3726-201ENSMUST00000203110 785 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm9111-201ENSMUST00000219394 709 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm4978-201ENSMUST00000071565 801 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rrp8Q9DB85 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm14270-201ENSMUST00000118388 846 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm12274-201ENSMUST00000120062 385 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm5621-201ENSMUST00000187303 640 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm18561-201ENSMUST00000206027 804 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm4604-201ENSMUST00000025040 390 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Map1b-203ENSMUST00000223725 2669 ntBASIC11.43□□□□□ -0.58
Rrp8Q9DB85 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms