Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm22331-201ENSMUST00000158066 136 ntBASIC11.74□□□□□ -0.53
Sf3a3Q9D554 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm45925-201ENSMUST00000218882 744 ntBASIC11.74□□□□□ -0.53
Sf3a3Q9D554 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.73□□□□□ -0.53
Sf3a3Q9D554 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.73□□□□□ -0.53
Sf3a3Q9D554 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms