Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cfap53Q9D439 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cfap53Q9D439 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.83□□□□□ -0.36
Cfap53Q9D439 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cfap53Q9D439 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cfap53Q9D439 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cfap53Q9D439 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm23949-201ENSMUST00000104027 127 ntBASIC12.82□□□□□ -0.36
Cfap53Q9D439 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm15711-201ENSMUST00000118889 535 ntBASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.82□□□□□ -0.36
Cfap53Q9D439 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm9797-202ENSMUST00000218003 294 ntBASIC12.82□□□□□ -0.36
Cfap53Q9D439 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cfap53Q9D439 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm11509-201ENSMUST00000117358 325 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm12380-201ENSMUST00000119012 544 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm14017-201ENSMUST00000121934 386 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm11960-201ENSMUST00000122068 925 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm28686-201ENSMUST00000187404 609 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm38117-201ENSMUST00000194653 939 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 159.1 ms