Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.22□□□□□ -0.61
Khdc3Q9CWU5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Gm4157-201ENSMUST00000211647 679 ntBASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Khdc3Q9CWU5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Khdc3Q9CWU5 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Rgr-203ENSMUST00000225070 4704 ntBASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Mir877-201ENSMUST00000104738 85 ntBASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Gm37666-201ENSMUST00000194110 866 ntBASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Gm43184-201ENSMUST00000197247 542 ntBASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 BC043934-202ENSMUST00000185694 2356 ntBASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Khdc3Q9CWU5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms