Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.69□□□□□ -0.22
Smc3Q9CW03 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.69□□□□□ -0.22
Smc3Q9CW03 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Gm44651-201ENSMUST00000207343 372 ntBASIC13.69□□□□□ -0.22
Smc3Q9CW03 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.69□□□□□ -0.22
Smc3Q9CW03 Cts7-204ENSMUST00000225321 1257 ntBASIC13.69□□□□□ -0.22
Smc3Q9CW03 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.69□□□□□ -0.22
Smc3Q9CW03 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smc3Q9CW03 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.68□□□□□ -0.22
Smc3Q9CW03 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.68□□□□□ -0.22
Smc3Q9CW03 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smc3Q9CW03 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm45865-201ENSMUST00000211815 945 ntBASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.68□□□□□ -0.22
Smc3Q9CW03 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm5705-201ENSMUST00000066241 711 ntBASIC13.68□□□□□ -0.22
Smc3Q9CW03 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smc3Q9CW03 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smc3Q9CW03 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.67□□□□□ -0.22
Smc3Q9CW03 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Gm2553-201ENSMUST00000215986 605 ntBASIC13.67□□□□□ -0.22
Smc3Q9CW03 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.67□□□□□ -0.22
Smc3Q9CW03 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.67□□□□□ -0.22
Smc3Q9CW03 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smc3Q9CW03 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms