Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Gm24248-201ENSMUST00000157321 322 ntBASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Gm8459-201ENSMUST00000162504 760 ntBASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Gm43752-201ENSMUST00000198475 697 ntBASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Gm6423-201ENSMUST00000204315 934 ntBASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nkx6-1Q99MA9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm45199-201ENSMUST00000207640 1507 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Mir671-201ENSMUST00000102432 98 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm11578-201ENSMUST00000118530 459 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm14213-201ENSMUST00000119778 768 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm22846-201ENSMUST00000157706 270 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm7719-201ENSMUST00000182374 975 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm19587-201ENSMUST00000191395 545 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm38114-201ENSMUST00000191877 1232 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm37638-201ENSMUST00000194337 1123 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm9884-201ENSMUST00000194343 1222 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm43380-201ENSMUST00000200421 220 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm44953-201ENSMUST00000208745 1286 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm8436-201ENSMUST00000210152 1080 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm5749-201ENSMUST00000210673 1090 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 AC153962.2-201ENSMUST00000219417 550 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Gm5641-201ENSMUST00000091130 1488 ntBASIC11□□□□□ -0.65
Nkx6-1Q99MA9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx6-1Q99MA9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms