Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.39□□□□□ -0.11
RtcbQ99LF4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.38□□□□□ -0.11
RtcbQ99LF4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm8111-201ENSMUST00000117659 987 ntBASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.38□□□□□ -0.11
RtcbQ99LF4 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm43969-201ENSMUST00000204833 535 ntBASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm5599-201ENSMUST00000209602 788 ntBASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm14005-208ENSMUST00000223654 681 ntBASIC14.38□□□□□ -0.11
RtcbQ99LF4 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RtcbQ99LF4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.37□□□□□ -0.11
RtcbQ99LF4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.37□□□□□ -0.11
RtcbQ99LF4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm6158-201ENSMUST00000109467 904 ntBASIC14.37□□□□□ -0.11
RtcbQ99LF4 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm12906-201ENSMUST00000154610 441 ntBASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm21778-201ENSMUST00000178779 471 ntBASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm9162-201ENSMUST00000182081 991 ntBASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm26976-201ENSMUST00000182929 908 ntBASIC14.37□□□□□ -0.11
RtcbQ99LF4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Gm8255-201ENSMUST00000218693 305 ntBASIC14.37□□□□□ -0.11
RtcbQ99LF4 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RtcbQ99LF4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RtcbQ99LF4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RtcbQ99LF4 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms