Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Thumpd1Q99J36 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Gm6023-201ENSMUST00000118217 606 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Gm8956-201ENSMUST00000203939 825 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Thumpd1Q99J36 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm14644-201ENSMUST00000116671 647 ntBASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm11989-201ENSMUST00000117240 672 ntBASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm11511-201ENSMUST00000118146 540 ntBASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Gm11362-201ENSMUST00000118838 850 ntBASIC10.37□□□□□ -0.75
Thumpd1Q99J36 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Thumpd1Q99J36 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms